Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Mir497b-201ENSMUST00000093601 125 ntBASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.52■□□□□ 0.08
Trim47Q8C0E3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Gm8584-201ENSMUST00000171982 758 ntBASIC15.52■□□□□ 0.08
Trim47Q8C0E3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Trim47Q8C0E3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
Trim47Q8C0E3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trim47Q8C0E3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim47Q8C0E3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim47Q8C0E3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim47Q8C0E3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trim47Q8C0E3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim47Q8C0E3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim47Q8C0E3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim47Q8C0E3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.52■□□□□ 0.07
Trim47Q8C0E3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim47Q8C0E3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Gm8927-201ENSMUST00000181978 981 ntBASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Gm17795-201ENSMUST00000214505 757 ntBASIC15.51■□□□□ 0.07
Trim47Q8C0E3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Gm3222-201ENSMUST00000071282 990 ntBASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim47Q8C0E3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms