Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Gm18766-201ENSMUST00000189811 808 ntBASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Ube3dQ8BX13 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Gm38294-201ENSMUST00000192831 381 ntBASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Gm45098-201ENSMUST00000207179 657 ntBASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.47□□□□□ -0.41
Ube3dQ8BX13 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.47□□□□□ -0.41
Ube3dQ8BX13 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ube3dQ8BX13 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ube3dQ8BX13 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ube3dQ8BX13 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ube3dQ8BX13 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ube3dQ8BX13 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ube3dQ8BX13 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ube3dQ8BX13 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ube3dQ8BX13 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ube3dQ8BX13 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms