Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Gm2445-201ENSMUST00000182798 989 ntBASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Gm29741-201ENSMUST00000192667 421 ntBASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Gm44344-201ENSMUST00000200287 129 ntBASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Gm5867-201ENSMUST00000063197 592 ntBASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Gm13223-201ENSMUST00000118609 747 ntBASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Gm13453-201ENSMUST00000118708 357 ntBASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Gm14767-201ENSMUST00000121559 586 ntBASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Gm27321-201ENSMUST00000185021 205 ntBASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Gm17837-201ENSMUST00000186435 985 ntBASIC14.19□□□□□ -0.14
Usp43Q8BUM9 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp43Q8BUM9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms