Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Gm12428-201ENSMUST00000119844 727 ntBASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Gm27306-201ENSMUST00000183970 107 ntBASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sfr1Q8BP27 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Gm46209-201ENSMUST00000217912 553 ntBASIC14.29□□□□□ -0.12
Sfr1Q8BP27 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.29□□□□□ -0.12
Sfr1Q8BP27 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Auts2-212ENSMUST00000178555 309 ntBASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Gm27321-201ENSMUST00000185021 205 ntBASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Gm10576-201ENSMUST00000191927 825 ntBASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms