Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp54Q8BL06 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp54Q8BL06 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Usp54Q8BL06 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp54Q8BL06 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp54Q8BL06 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp54Q8BL06 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp54Q8BL06 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp54Q8BL06 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Usp54Q8BL06 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Usp54Q8BL06 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Usp54Q8BL06 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp54Q8BL06 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC19.58■□□□□ 0.73
Usp54Q8BL06 Gm12363-201ENSMUST00000122250 668 ntBASIC19.58■□□□□ 0.73
Usp54Q8BL06 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC19.58■□□□□ 0.73
Usp54Q8BL06 Gm5896-201ENSMUST00000189662 1024 ntBASIC19.58■□□□□ 0.73
Usp54Q8BL06 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC19.58■□□□□ 0.73
Usp54Q8BL06 Gm9368-201ENSMUST00000219348 831 ntBASIC19.58■□□□□ 0.73
Usp54Q8BL06 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp54Q8BL06 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Usp54Q8BL06 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp54Q8BL06 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC19.58■□□□□ 0.73
Usp54Q8BL06 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp54Q8BL06 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp54Q8BL06 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Usp54Q8BL06 Gm38197-201ENSMUST00000192320 2122 ntBASIC19.58■□□□□ 0.72
Usp54Q8BL06 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp54Q8BL06 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Usp54Q8BL06 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp54Q8BL06 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Usp54Q8BL06 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp54Q8BL06 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Usp54Q8BL06 Gm8793-201ENSMUST00000183069 1303 ntBASIC19.58■□□□□ 0.72
Usp54Q8BL06 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp54Q8BL06 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp54Q8BL06 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Gm6447-201ENSMUST00000118905 835 ntBASIC19.57■□□□□ 0.72
Usp54Q8BL06 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Gm16379-201ENSMUST00000161469 348 ntBASIC19.57■□□□□ 0.72
Usp54Q8BL06 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Gm8762-201ENSMUST00000193486 339 ntBASIC19.57■□□□□ 0.72
Usp54Q8BL06 Gm7619-201ENSMUST00000210649 1282 ntBASIC19.57■□□□□ 0.72
Usp54Q8BL06 AC132384.14-201ENSMUST00000219346 1147 ntBASIC19.57■□□□□ 0.72
Usp54Q8BL06 AC134335.2-201ENSMUST00000227660 440 ntBASIC19.57■□□□□ 0.72
Usp54Q8BL06 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC19.57■□□□□ 0.72
Usp54Q8BL06 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC19.57■□□□□ 0.72
Usp54Q8BL06 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Gm9176-201ENSMUST00000219955 1120 ntBASIC19.57■□□□□ 0.72
Usp54Q8BL06 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC19.57■□□□□ 0.72
Usp54Q8BL06 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp54Q8BL06 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp54Q8BL06 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp54Q8BL06 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp54Q8BL06 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp54Q8BL06 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp54Q8BL06 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Usp54Q8BL06 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp54Q8BL06 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Usp54Q8BL06 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp54Q8BL06 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp54Q8BL06 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp54Q8BL06 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp54Q8BL06 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Usp54Q8BL06 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp54Q8BL06 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp54Q8BL06 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp54Q8BL06 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms