Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.04■□□□□ -0
Nop53Q8BK35 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.04■□□□□ -0
Nop53Q8BK35 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Nop53Q8BK35 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nop53Q8BK35 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
Nop53Q8BK35 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.03■□□□□ -0
Nop53Q8BK35 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nop53Q8BK35 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.03■□□□□ -0
Nop53Q8BK35 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nop53Q8BK35 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nop53Q8BK35 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nop53Q8BK35 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nop53Q8BK35 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nop53Q8BK35 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nop53Q8BK35 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nop53Q8BK35 Gm6973-201ENSMUST00000117080 721 ntBASIC15.03■□□□□ -0
Nop53Q8BK35 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.03■□□□□ -0
Nop53Q8BK35 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.03■□□□□ -0
Nop53Q8BK35 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nop53Q8BK35 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nop53Q8BK35 Gm8396-201ENSMUST00000057361 823 ntBASIC15.03■□□□□ -0
Nop53Q8BK35 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nop53Q8BK35 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Nop53Q8BK35 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Nop53Q8BK35 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nop53Q8BK35 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.02■□□□□ -0
Nop53Q8BK35 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nop53Q8BK35 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Nop53Q8BK35 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nop53Q8BK35 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Nop53Q8BK35 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Nop53Q8BK35 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nop53Q8BK35 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Nop53Q8BK35 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Nop53Q8BK35 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Nop53Q8BK35 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nop53Q8BK35 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Nop53Q8BK35 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nop53Q8BK35 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Nop53Q8BK35 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.02■□□□□ -0
Nop53Q8BK35 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nop53Q8BK35 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nop53Q8BK35 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nop53Q8BK35 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nop53Q8BK35 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Nop53Q8BK35 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nop53Q8BK35 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.02■□□□□ -0
Nop53Q8BK35 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nop53Q8BK35 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nop53Q8BK35 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nop53Q8BK35 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.02□□□□□ -0.01
Nop53Q8BK35 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nop53Q8BK35 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nop53Q8BK35 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
Nop53Q8BK35 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Nop53Q8BK35 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nop53Q8BK35 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nop53Q8BK35 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Nop53Q8BK35 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nop53Q8BK35 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nop53Q8BK35 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nop53Q8BK35 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nop53Q8BK35 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nop53Q8BK35 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nop53Q8BK35 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nop53Q8BK35 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nop53Q8BK35 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nop53Q8BK35 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nop53Q8BK35 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nop53Q8BK35 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nop53Q8BK35 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Nop53Q8BK35 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.01□□□□□ -0.01
Nop53Q8BK35 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nop53Q8BK35 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nop53Q8BK35 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nop53Q8BK35 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Nop53Q8BK35 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Nop53Q8BK35 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.01□□□□□ -0.01
Nop53Q8BK35 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Nop53Q8BK35 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nop53Q8BK35 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.01□□□□□ -0.01
Nop53Q8BK35 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nop53Q8BK35 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nop53Q8BK35 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.01□□□□□ -0.01
Nop53Q8BK35 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.01□□□□□ -0.01
Nop53Q8BK35 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nop53Q8BK35 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nop53Q8BK35 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms