Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.67□□□□□ -0.06
Ccdc40Q8BI79 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ccdc40Q8BI79 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc40Q8BI79 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.67□□□□□ -0.06
Ccdc40Q8BI79 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc40Q8BI79 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc40Q8BI79 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc40Q8BI79 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.67□□□□□ -0.06
Ccdc40Q8BI79 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.67□□□□□ -0.06
Ccdc40Q8BI79 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc40Q8BI79 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc40Q8BI79 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc40Q8BI79 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc40Q8BI79 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc40Q8BI79 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.67□□□□□ -0.06
Ccdc40Q8BI79 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ccdc40Q8BI79 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc40Q8BI79 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc40Q8BI79 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc40Q8BI79 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.67□□□□□ -0.06
Ccdc40Q8BI79 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Gm4995-201ENSMUST00000117247 432 ntBASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.66□□□□□ -0.06
Ccdc40Q8BI79 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Gm18889-201ENSMUST00000174284 929 ntBASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc40Q8BI79 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.65□□□□□ -0.07
Ccdc40Q8BI79 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.07
Ccdc40Q8BI79 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Ccdc40Q8BI79 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms