Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm23935-201ENSMUST00000102303 57 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm24270-201ENSMUST00000102326 57 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm24245-201ENSMUST00000157318 57 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm29310-201ENSMUST00000185468 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm21825-201ENSMUST00000185728 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm29109-201ENSMUST00000185895 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm21896-201ENSMUST00000186520 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm21873-201ENSMUST00000186728 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm21794-201ENSMUST00000187056 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm21880-201ENSMUST00000187275 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm21826-201ENSMUST00000187451 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm21198-201ENSMUST00000188393 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm21749-201ENSMUST00000189343 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm21901-201ENSMUST00000189568 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm29424-201ENSMUST00000189716 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm28599-201ENSMUST00000189838 694 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm21867-201ENSMUST00000189917 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm29269-201ENSMUST00000190087 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm21722-201ENSMUST00000190153 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm28423-201ENSMUST00000190701 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm21899-201ENSMUST00000190745 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm21910-201ENSMUST00000191163 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm21849-201ENSMUST00000191571 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm28678-201ENSMUST00000191593 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm20910-201ENSMUST00000193268 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm21871-201ENSMUST00000194621 696 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn3Q8BHH8 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clrn3Q8BHH8 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clrn3Q8BHH8 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clrn3Q8BHH8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Clrn3Q8BHH8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clrn3Q8BHH8 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clrn3Q8BHH8 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Clrn3Q8BHH8 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clrn3Q8BHH8 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clrn3Q8BHH8 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clrn3Q8BHH8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clrn3Q8BHH8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clrn3Q8BHH8 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Clrn3Q8BHH8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Clrn3Q8BHH8 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Gm12882-201ENSMUST00000121696 517 ntBASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms