Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Gm12091-201ENSMUST00000146791 830 ntBASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Gm6745-201ENSMUST00000199216 526 ntBASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh19Q80TF3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Gm23984-201ENSMUST00000157139 203 ntBASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Gm5354-201ENSMUST00000182417 973 ntBASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Gm7653-201ENSMUST00000214567 508 ntBASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh19Q80TF3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Gm12490-201ENSMUST00000120255 560 ntBASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms