Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ush1gQ80T11 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ush1gQ80T11 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ush1gQ80T11 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.33■□□□□ 0.04
Ush1gQ80T11 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ush1gQ80T11 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.33■□□□□ 0.04
Ush1gQ80T11 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.33■□□□□ 0.04
Ush1gQ80T11 Gm43630-201ENSMUST00000201550 776 ntBASIC15.33■□□□□ 0.04
Ush1gQ80T11 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ush1gQ80T11 Gm5425-201ENSMUST00000214125 459 ntBASIC15.33■□□□□ 0.04
Ush1gQ80T11 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.33■□□□□ 0.04
Ush1gQ80T11 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ush1gQ80T11 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ush1gQ80T11 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ush1gQ80T11 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ush1gQ80T11 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ush1gQ80T11 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ush1gQ80T11 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ush1gQ80T11 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ush1gQ80T11 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.33■□□□□ 0.04
Ush1gQ80T11 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ush1gQ80T11 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ush1gQ80T11 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ush1gQ80T11 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Gm12341-201ENSMUST00000119724 503 ntBASIC15.32■□□□□ 0.04
Ush1gQ80T11 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.32■□□□□ 0.04
Ush1gQ80T11 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.32■□□□□ 0.04
Ush1gQ80T11 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1gQ80T11 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1gQ80T11 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.31■□□□□ 0.04
Ush1gQ80T11 Gm15957-201ENSMUST00000118893 974 ntBASIC15.31■□□□□ 0.04
Ush1gQ80T11 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.31■□□□□ 0.04
Ush1gQ80T11 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.31■□□□□ 0.04
Ush1gQ80T11 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.31■□□□□ 0.04
Ush1gQ80T11 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Gm5356-201ENSMUST00000093326 615 ntBASIC15.31■□□□□ 0.04
Ush1gQ80T11 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.31■□□□□ 0.04
Ush1gQ80T11 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.31■□□□□ 0.04
Ush1gQ80T11 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.3■□□□□ 0.04
Ush1gQ80T11 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Gm11425-201ENSMUST00000119608 498 ntBASIC15.3■□□□□ 0.04
Ush1gQ80T11 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms