Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Gm12341-201ENSMUST00000119724 503 ntBASIC12.97□□□□□ -0.33
Pif1Q80SX8 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.97□□□□□ -0.33
Pif1Q80SX8 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.97□□□□□ -0.33
Pif1Q80SX8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pif1Q80SX8 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pif1Q80SX8 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pif1Q80SX8 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.97□□□□□ -0.33
Pif1Q80SX8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.96□□□□□ -0.33
Pif1Q80SX8 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.96□□□□□ -0.33
Pif1Q80SX8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.96□□□□□ -0.33
Pif1Q80SX8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
Pif1Q80SX8 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Gm17150-201ENSMUST00000165577 381 ntBASIC12.96□□□□□ -0.33
Pif1Q80SX8 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Mir7085-201ENSMUST00000184353 66 ntBASIC12.96□□□□□ -0.33
Pif1Q80SX8 Gm21470-201ENSMUST00000187680 696 ntBASIC12.96□□□□□ -0.33
Pif1Q80SX8 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Pif1Q80SX8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pif1Q80SX8 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pif1Q80SX8 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pif1Q80SX8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pif1Q80SX8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pif1Q80SX8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pif1Q80SX8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pif1Q80SX8 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pif1Q80SX8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pif1Q80SX8 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pif1Q80SX8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pif1Q80SX8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Gm12882-201ENSMUST00000121696 517 ntBASIC12.95□□□□□ -0.34
Pif1Q80SX8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.95□□□□□ -0.34
Pif1Q80SX8 Gm27701-201ENSMUST00000184498 110 ntBASIC12.95□□□□□ -0.34
Pif1Q80SX8 Gm28911-201ENSMUST00000188837 117 ntBASIC12.95□□□□□ -0.34
Pif1Q80SX8 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.95□□□□□ -0.34
Pif1Q80SX8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.95□□□□□ -0.34
Pif1Q80SX8 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.95□□□□□ -0.34
Pif1Q80SX8 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms