Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm8Q6ZWM4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.7□□□□□ -0.06
Lsm8Q6ZWM4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm8Q6ZWM4 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm8Q6ZWM4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.7□□□□□ -0.06
Lsm8Q6ZWM4 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm8Q6ZWM4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm8Q6ZWM4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Gm15393-201ENSMUST00000120499 219 ntBASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Gm17837-201ENSMUST00000186435 985 ntBASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Gm43703-201ENSMUST00000200523 763 ntBASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Lsm8Q6ZWM4 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Gm13223-201ENSMUST00000118609 747 ntBASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Gm4804-201ENSMUST00000182234 999 ntBASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Gm44719-201ENSMUST00000206404 149 ntBASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Gm5425-201ENSMUST00000214125 459 ntBASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Lsm8Q6ZWM4 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm8Q6ZWM4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.67□□□□□ -0.06
Lsm8Q6ZWM4 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm8Q6ZWM4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm8Q6ZWM4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm8Q6ZWM4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm8Q6ZWM4 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm8Q6ZWM4 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.67□□□□□ -0.06
Lsm8Q6ZWM4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Lsm8Q6ZWM4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms