Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup98Q6PFD9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup98Q6PFD9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup98Q6PFD9 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Gm38144-201ENSMUST00000192790 465 ntBASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Gm37497-201ENSMUST00000195830 798 ntBASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC16.24■□□□□ 0.19
Nup98Q6PFD9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Mir1247-201ENSMUST00000116706 82 ntBASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Mir8109-201ENSMUST00000184375 117 ntBASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nup98Q6PFD9 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC16.23■□□□□ 0.19
Nup98Q6PFD9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nup98Q6PFD9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup98Q6PFD9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup98Q6PFD9 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.23■□□□□ 0.19
Nup98Q6PFD9 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup98Q6PFD9 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.23■□□□□ 0.19
Nup98Q6PFD9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup98Q6PFD9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup98Q6PFD9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nup98Q6PFD9 Gm15198-201ENSMUST00000117283 177 ntBASIC16.23■□□□□ 0.19
Nup98Q6PFD9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Nup98Q6PFD9 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup98Q6PFD9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup98Q6PFD9 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup98Q6PFD9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup98Q6PFD9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nup98Q6PFD9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup98Q6PFD9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Gm16479-201ENSMUST00000121706 932 ntBASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Gm37922-201ENSMUST00000195596 455 ntBASIC16.22■□□□□ 0.19
Nup98Q6PFD9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Gm10146-201ENSMUST00000072739 309 ntBASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Gm45684-201ENSMUST00000210244 1571 ntBASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms