Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc85bQ6PDY0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc85bQ6PDY0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc85bQ6PDY0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc85bQ6PDY0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc85bQ6PDY0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc85bQ6PDY0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc85bQ6PDY0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Gm8749-201ENSMUST00000117737 331 ntBASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Gm13689-201ENSMUST00000119360 685 ntBASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Gm9726-201ENSMUST00000180321 678 ntBASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc85bQ6PDY0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 Gm38341-201ENSMUST00000195357 515 ntBASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 Gm19078-201ENSMUST00000206311 727 ntBASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc85bQ6PDY0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Gm13612-201ENSMUST00000119276 390 ntBASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Gm11524-201ENSMUST00000119349 807 ntBASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Gm22902-201ENSMUST00000158488 302 ntBASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Gm43138-201ENSMUST00000199123 708 ntBASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Gm6334-201ENSMUST00000207083 228 ntBASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.54□□□□□ -0.08
Ccdc85bQ6PDY0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms