Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Gm12428-201ENSMUST00000119844 727 ntBASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Smarcc2Q6PDG5 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Gm14057-201ENSMUST00000120631 482 ntBASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Gm12151-201ENSMUST00000121374 290 ntBASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Gm44344-201ENSMUST00000200287 129 ntBASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcc2Q6PDG5 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Mir1897-201ENSMUST00000122581 272 ntBASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Dupd1-202ENSMUST00000224735 548 ntBASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Shd-206ENSMUST00000225145 998 ntBASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms