Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm9727-201ENSMUST00000161387 555 ntBASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Gm18206-201ENSMUST00000207027 926 ntBASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 AW822252-206ENSMUST00000208904 237 ntBASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Gm15427-201ENSMUST00000117288 531 ntBASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.86□□□□□ -0.35
Smarcd3Q6P9Z1 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Gm6973-201ENSMUST00000117080 721 ntBASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.85□□□□□ -0.35
Smarcd3Q6P9Z1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms