Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slx4Q6P1D7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slx4Q6P1D7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Slx4Q6P1D7 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Slx4Q6P1D7 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Slx4Q6P1D7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Gm45760-201ENSMUST00000212190 1782 ntBASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Gm37305-201ENSMUST00000195714 4279 ntBASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slx4Q6P1D7 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Gm11964-201ENSMUST00000120982 444 ntBASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Gm45504-201ENSMUST00000211407 2107 ntBASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Gm8793-201ENSMUST00000183069 1303 ntBASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Gm10461-201ENSMUST00000202073 4786 ntBASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Gm10608-202ENSMUST00000213924 676 ntBASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Nsd1-205ENSMUST00000224693 852 ntBASIC21.19■□□□□ 0.98
Slx4Q6P1D7 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Slx4Q6P1D7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Slx4Q6P1D7 Gm12020-201ENSMUST00000119030 2042 ntBASIC21.18■□□□□ 0.98
Slx4Q6P1D7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slx4Q6P1D7 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slx4Q6P1D7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Slx4Q6P1D7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Slx4Q6P1D7 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC21.18■□□□□ 0.98
Slx4Q6P1D7 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Slx4Q6P1D7 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Slx4Q6P1D7 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Slx4Q6P1D7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slx4Q6P1D7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Slx4Q6P1D7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Gm16505-201ENSMUST00000179981 232 ntBASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Gm45186-201ENSMUST00000206874 478 ntBASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms