Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC16.32■□□□□ 0.2
Scaf8Q6DID3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC16.32■□□□□ 0.2
Scaf8Q6DID3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scaf8Q6DID3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scaf8Q6DID3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scaf8Q6DID3 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC16.32■□□□□ 0.2
Scaf8Q6DID3 Gm18473-201ENSMUST00000220543 868 ntBASIC16.32■□□□□ 0.2
Scaf8Q6DID3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scaf8Q6DID3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scaf8Q6DID3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scaf8Q6DID3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scaf8Q6DID3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scaf8Q6DID3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scaf8Q6DID3 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC16.32■□□□□ 0.2
Scaf8Q6DID3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Scaf8Q6DID3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Scaf8Q6DID3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Scaf8Q6DID3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scaf8Q6DID3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scaf8Q6DID3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scaf8Q6DID3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scaf8Q6DID3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Gm7993-201ENSMUST00000200970 1384 ntBASIC16.31■□□□□ 0.2
Scaf8Q6DID3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 AC153961.1-201ENSMUST00000217760 385 ntBASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Mir433-201ENSMUST00000093564 124 ntBASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Carlr-201ENSMUST00000181515 2574 ntBASIC16.31■□□□□ 0.2
Scaf8Q6DID3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Gm13369-201ENSMUST00000119442 987 ntBASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Gm24420-201ENSMUST00000176676 59 ntBASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Gm7895-201ENSMUST00000187459 1173 ntBASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Gm43133-201ENSMUST00000197472 463 ntBASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Gm45878-201ENSMUST00000211839 241 ntBASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Gm9368-201ENSMUST00000219348 831 ntBASIC16.3■□□□□ 0.2
Scaf8Q6DID3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 CT573034.1-201ENSMUST00000222983 313 ntBASIC16.3■□□□□ 0.2
Scaf8Q6DID3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf8Q6DID3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf8Q6DID3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf8Q6DID3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf8Q6DID3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf8Q6DID3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf8Q6DID3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf8Q6DID3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf8Q6DID3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.29■□□□□ 0.2
Scaf8Q6DID3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf8Q6DID3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms