Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.72■□□□□ 0.43
Clcn1Q64347 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.72■□□□□ 0.43
Clcn1Q64347 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC17.72■□□□□ 0.43
Clcn1Q64347 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn1Q64347 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn1Q64347 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn1Q64347 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn1Q64347 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn1Q64347 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn1Q64347 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn1Q64347 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Clcn1Q64347 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn1Q64347 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn1Q64347 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Clcn1Q64347 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Clcn1Q64347 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn1Q64347 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.71■□□□□ 0.43
Clcn1Q64347 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Clcn1Q64347 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC17.71■□□□□ 0.43
Clcn1Q64347 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn1Q64347 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn1Q64347 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn1Q64347 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Clcn1Q64347 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn1Q64347 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn1Q64347 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn1Q64347 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn1Q64347 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.71■□□□□ 0.43
Clcn1Q64347 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn1Q64347 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn1Q64347 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Clcn1Q64347 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn1Q64347 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Clcn1Q64347 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Clcn1Q64347 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Clcn1Q64347 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn1Q64347 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn1Q64347 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn1Q64347 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn1Q64347 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn1Q64347 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17.7■□□□□ 0.42
Clcn1Q64347 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn1Q64347 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn1Q64347 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Clcn1Q64347 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Clcn1Q64347 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn1Q64347 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.7■□□□□ 0.42
Clcn1Q64347 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.7■□□□□ 0.42
Clcn1Q64347 Gm13392-201ENSMUST00000117708 150 ntBASIC17.7■□□□□ 0.42
Clcn1Q64347 Gm13226-201ENSMUST00000117838 404 ntBASIC17.7■□□□□ 0.42
Clcn1Q64347 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn1Q64347 Gm19078-201ENSMUST00000206311 727 ntBASIC17.7■□□□□ 0.42
Clcn1Q64347 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn1Q64347 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Clcn1Q64347 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC17.7■□□□□ 0.42
Clcn1Q64347 Ntrk2-209ENSMUST00000225950 2640 ntBASIC17.7■□□□□ 0.42
Clcn1Q64347 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn1Q64347 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn1Q64347 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Clcn1Q64347 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Clcn1Q64347 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn1Q64347 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC17.7■□□□□ 0.42
Clcn1Q64347 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn1Q64347 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Clcn1Q64347 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn1Q64347 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC17.7■□□□□ 0.42
Clcn1Q64347 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn1Q64347 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn1Q64347 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.7■□□□□ 0.42
Clcn1Q64347 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn1Q64347 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Clcn1Q64347 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Gm15429-201ENSMUST00000151268 798 ntBASIC17.69■□□□□ 0.42
Clcn1Q64347 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Gm18905-201ENSMUST00000205454 928 ntBASIC17.69■□□□□ 0.42
Clcn1Q64347 Gm7561-201ENSMUST00000211203 886 ntBASIC17.69■□□□□ 0.42
Clcn1Q64347 Rassf8-202ENSMUST00000058538 1131 ntBASIC17.69■□□□□ 0.42
Clcn1Q64347 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms