Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC16.19■□□□□ 0.18
Scn9aQ62205 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scn9aQ62205 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn9aQ62205 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn9aQ62205 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Scn9aQ62205 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn9aQ62205 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scn9aQ62205 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn9aQ62205 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn9aQ62205 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn9aQ62205 Gm18630-201ENSMUST00000222109 1397 ntBASIC16.19■□□□□ 0.18
Scn9aQ62205 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Scn9aQ62205 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn9aQ62205 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scn9aQ62205 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Scn9aQ62205 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC16.18■□□□□ 0.18
Scn9aQ62205 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.18■□□□□ 0.18
Scn9aQ62205 Gm4819-201ENSMUST00000182170 1009 ntBASIC16.18■□□□□ 0.18
Scn9aQ62205 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.18■□□□□ 0.18
Scn9aQ62205 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Scn9aQ62205 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 Gm43579-201ENSMUST00000202387 1307 ntBASIC16.18■□□□□ 0.18
Scn9aQ62205 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC16.18■□□□□ 0.18
Scn9aQ62205 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Scn9aQ62205 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.18■□□□□ 0.18
Scn9aQ62205 Gm11591-201ENSMUST00000120063 702 ntBASIC16.18■□□□□ 0.18
Scn9aQ62205 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC16.18■□□□□ 0.18
Scn9aQ62205 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC16.18■□□□□ 0.18
Scn9aQ62205 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC16.18■□□□□ 0.18
Scn9aQ62205 Gm16505-201ENSMUST00000179981 232 ntBASIC16.18■□□□□ 0.18
Scn9aQ62205 Gm3890-201ENSMUST00000182416 207 ntBASIC16.18■□□□□ 0.18
Scn9aQ62205 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.18■□□□□ 0.18
Scn9aQ62205 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Scn9aQ62205 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Scn9aQ62205 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Scn9aQ62205 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn9aQ62205 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.17■□□□□ 0.18
Scn9aQ62205 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn9aQ62205 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Scn9aQ62205 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn9aQ62205 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn9aQ62205 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Scn9aQ62205 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Scn9aQ62205 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn9aQ62205 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn9aQ62205 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn9aQ62205 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scn9aQ62205 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scn9aQ62205 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn9aQ62205 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scn9aQ62205 Gm45186-201ENSMUST00000206874 478 ntBASIC16.17■□□□□ 0.18
Scn9aQ62205 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn9aQ62205 CT030182.1-201ENSMUST00000225935 533 ntBASIC16.17■□□□□ 0.18
Scn9aQ62205 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn9aQ62205 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn9aQ62205 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Scn9aQ62205 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn9aQ62205 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Scn9aQ62205 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scn9aQ62205 Gm43289-201ENSMUST00000200537 1475 ntBASIC16.17■□□□□ 0.18
Scn9aQ62205 Gm11964-201ENSMUST00000120982 444 ntBASIC16.17■□□□□ 0.18
Scn9aQ62205 Gm27341-201ENSMUST00000183570 106 ntBASIC16.17■□□□□ 0.18
Scn9aQ62205 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC16.17■□□□□ 0.18
Scn9aQ62205 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC16.17■□□□□ 0.18
Scn9aQ62205 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.17■□□□□ 0.18
Scn9aQ62205 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn9aQ62205 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
Scn9aQ62205 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn9aQ62205 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn9aQ62205 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn9aQ62205 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn9aQ62205 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn9aQ62205 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn9aQ62205 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
Scn9aQ62205 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.16■□□□□ 0.18
Scn9aQ62205 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn9aQ62205 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn9aQ62205 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Scn9aQ62205 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms