Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.43□□□□□ -0.74
Foxc1Q61572 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Foxc1Q61572 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC10.43□□□□□ -0.74
Foxc1Q61572 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.43□□□□□ -0.74
Foxc1Q61572 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC10.43□□□□□ -0.74
Foxc1Q61572 Gm9726-201ENSMUST00000180321 678 ntBASIC10.43□□□□□ -0.74
Foxc1Q61572 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Gm27321-201ENSMUST00000185021 205 ntBASIC10.43□□□□□ -0.74
Foxc1Q61572 Mir7023-201ENSMUST00000185093 64 ntBASIC10.43□□□□□ -0.74
Foxc1Q61572 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.43□□□□□ -0.74
Foxc1Q61572 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC10.43□□□□□ -0.74
Foxc1Q61572 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Foxc1Q61572 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Foxc1Q61572 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Gm13034-201ENSMUST00000121342 3177 ntBASIC10.43□□□□□ -0.74
Foxc1Q61572 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Foxc1Q61572 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Foxc1Q61572 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
Foxc1Q61572 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
Foxc1Q61572 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Gm5479-201ENSMUST00000160578 435 ntBASIC10.42□□□□□ -0.74
Foxc1Q61572 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC10.42□□□□□ -0.74
Foxc1Q61572 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC10.42□□□□□ -0.74
Foxc1Q61572 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Foxc1Q61572 Gm4691-201ENSMUST00000182339 1000 ntBASIC10.42□□□□□ -0.74
Foxc1Q61572 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Foxc1Q61572 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Gm37533-201ENSMUST00000193848 545 ntBASIC10.42□□□□□ -0.74
Foxc1Q61572 Gm2451-201ENSMUST00000199447 999 ntBASIC10.42□□□□□ -0.74
Foxc1Q61572 Gm10290-201ENSMUST00000200451 999 ntBASIC10.42□□□□□ -0.74
Foxc1Q61572 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.42□□□□□ -0.74
Foxc1Q61572 Gm45098-201ENSMUST00000207179 657 ntBASIC10.42□□□□□ -0.74
Foxc1Q61572 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC10.42□□□□□ -0.74
Foxc1Q61572 AC154252.1-201ENSMUST00000226041 473 ntBASIC10.42□□□□□ -0.74
Foxc1Q61572 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Foxc1Q61572 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Foxc1Q61572 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Foxc1Q61572 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC10.42□□□□□ -0.74
Foxc1Q61572 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC10.42□□□□□ -0.74
Foxc1Q61572 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Foxc1Q61572 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Foxc1Q61572 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC10.41□□□□□ -0.74
Foxc1Q61572 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm45779-201ENSMUST00000212189 4064 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms