Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm29109-201ENSMUST00000185895 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm21896-201ENSMUST00000186520 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm21873-201ENSMUST00000186728 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm21794-201ENSMUST00000187056 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm21880-201ENSMUST00000187275 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm21826-201ENSMUST00000187451 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm21198-201ENSMUST00000188393 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm21749-201ENSMUST00000189343 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm21901-201ENSMUST00000189568 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm29424-201ENSMUST00000189716 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm28599-201ENSMUST00000189838 694 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm21867-201ENSMUST00000189917 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm29269-201ENSMUST00000190087 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm21722-201ENSMUST00000190153 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm28423-201ENSMUST00000190701 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm21899-201ENSMUST00000190745 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm21910-201ENSMUST00000191163 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm21849-201ENSMUST00000191571 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm28678-201ENSMUST00000191593 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm20910-201ENSMUST00000193268 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm21871-201ENSMUST00000194621 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm6888-201ENSMUST00000221983 706 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ClpbQ60649 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ClpbQ60649 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.48□□□□□ -0.25
ClpbQ60649 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ClpbQ60649 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.47□□□□□ -0.25
ClpbQ60649 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
ClpbQ60649 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ClpbQ60649 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ClpbQ60649 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ClpbQ60649 Gm24543-201ENSMUST00000103867 82 ntBASIC13.47□□□□□ -0.25
ClpbQ60649 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.47□□□□□ -0.25
ClpbQ60649 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ClpbQ60649 Gm14767-201ENSMUST00000121559 586 ntBASIC13.47□□□□□ -0.25
ClpbQ60649 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ClpbQ60649 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.47□□□□□ -0.25
ClpbQ60649 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.47□□□□□ -0.25
ClpbQ60649 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ClpbQ60649 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.47□□□□□ -0.25
ClpbQ60649 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
ClpbQ60649 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpbQ60649 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.46□□□□□ -0.25
ClpbQ60649 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
ClpbQ60649 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
ClpbQ60649 Gm13223-201ENSMUST00000118609 747 ntBASIC13.46□□□□□ -0.25
ClpbQ60649 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms