Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5d-4Q5R1F6 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Gm2756-201ENSMUST00000195851 400 ntBASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav5d-4Q5R1F6 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Gm15957-201ENSMUST00000118893 974 ntBASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Gm24158-201ENSMUST00000175263 71 ntBASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Gm27702-201ENSMUST00000184512 56 ntBASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Chchd1-203ENSMUST00000224633 557 ntBASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 BC001981-202ENSMUST00000191393 1545 ntBASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5d-4Q5R1F6 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms