Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Gm27430-201ENSMUST00000184585 107 ntBASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Gm44333-201ENSMUST00000197168 107 ntBASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Rnf20Q5DTM8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rnf20Q5DTM8 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rnf20Q5DTM8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rnf20Q5DTM8 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rnf20Q5DTM8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rnf20Q5DTM8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rnf20Q5DTM8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf20Q5DTM8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Gm15653-201ENSMUST00000119247 907 ntBASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Gm25144-201ENSMUST00000179561 110 ntBASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Gm25352-201ENSMUST00000179815 110 ntBASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Gm27622-201ENSMUST00000183779 60 ntBASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Gm18027-201ENSMUST00000218947 619 ntBASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms