Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Shank3Q4ACU6 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank3Q4ACU6 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Shank3Q4ACU6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank3Q4ACU6 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank3Q4ACU6 Gm6447-201ENSMUST00000118905 835 ntBASIC17.06■□□□□ 0.32
Shank3Q4ACU6 Gm24548-201ENSMUST00000158650 108 ntBASIC17.06■□□□□ 0.32
Shank3Q4ACU6 AU022133-201ENSMUST00000200601 873 ntBASIC17.06■□□□□ 0.32
Shank3Q4ACU6 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Shank3Q4ACU6 CT030182.1-201ENSMUST00000225935 533 ntBASIC17.06■□□□□ 0.32
Shank3Q4ACU6 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Shank3Q4ACU6 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank3Q4ACU6 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank3Q4ACU6 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank3Q4ACU6 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank3Q4ACU6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank3Q4ACU6 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank3Q4ACU6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Shank3Q4ACU6 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Gm12012-201ENSMUST00000118857 1066 ntBASIC17.05■□□□□ 0.32
Shank3Q4ACU6 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Gm5781-201ENSMUST00000219792 443 ntBASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank3Q4ACU6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank3Q4ACU6 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC17.04■□□□□ 0.32
Shank3Q4ACU6 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shank3Q4ACU6 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC17.04■□□□□ 0.32
Shank3Q4ACU6 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank3Q4ACU6 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank3Q4ACU6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank3Q4ACU6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank3Q4ACU6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank3Q4ACU6 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank3Q4ACU6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank3Q4ACU6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Shank3Q4ACU6 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC17.04■□□□□ 0.32
Shank3Q4ACU6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shank3Q4ACU6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank3Q4ACU6 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shank3Q4ACU6 Snord83b-201ENSMUST00000104546 94 ntBASIC17.04■□□□□ 0.32
Shank3Q4ACU6 Gm11637-201ENSMUST00000120601 592 ntBASIC17.04■□□□□ 0.32
Shank3Q4ACU6 Gm32025-201ENSMUST00000217960 307 ntBASIC17.04■□□□□ 0.32
Shank3Q4ACU6 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC17.04■□□□□ 0.32
Shank3Q4ACU6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank3Q4ACU6 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Gm15889-202ENSMUST00000212669 2443 ntBASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Gm11439-201ENSMUST00000118598 409 ntBASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Gm37489-201ENSMUST00000191883 159 ntBASIC17.03■□□□□ 0.32
Shank3Q4ACU6 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Gm6015-201ENSMUST00000217493 1586 ntBASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shank3Q4ACU6 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shank3Q4ACU6 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Shank3Q4ACU6 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shank3Q4ACU6 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms