Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Shd-206ENSMUST00000225145 998 ntBASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Cdkl5Q3UTQ8 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Gm33320-201ENSMUST00000192232 530 ntBASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl5Q3UTQ8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkl5Q3UTQ8 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms