Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Gm10253-201ENSMUST00000194270 940 ntBASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Mir125a-201ENSMUST00000083545 68 ntBASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Gm18766-201ENSMUST00000189811 808 ntBASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Chchd1-203ENSMUST00000224633 557 ntBASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brf2Q3UAW9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Gm5566-201ENSMUST00000116118 459 ntBASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Gm27702-201ENSMUST00000184512 56 ntBASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Gm7774-201ENSMUST00000200064 533 ntBASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Brf2Q3UAW9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Brf2Q3UAW9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Brf2Q3UAW9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Brf2Q3UAW9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Brf2Q3UAW9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Brf2Q3UAW9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms