Protein–RNA interactions for Protein: Q3U587

Gm10842, Predicted gene 10842 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10842Q3U587 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10842Q3U587 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10842Q3U587 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC10.46□□□□□ -0.74
Gm10842Q3U587 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10842Q3U587 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.74
Gm10842Q3U587 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10842Q3U587 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10842Q3U587 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10842Q3U587 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10842Q3U587 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10842Q3U587 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Gm10842Q3U587 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10842Q3U587 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10842Q3U587 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10842Q3U587 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10842Q3U587 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10842Q3U587 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Matn2-203ENSMUST00000226766 3252 ntBASIC10.45□□□□□ -0.74
Gm10842Q3U587 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.45□□□□□ -0.74
Gm10842Q3U587 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10842Q3U587 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Gm10842Q3U587 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Gm10499-201ENSMUST00000174094 934 ntBASIC10.44□□□□□ -0.74
Gm10842Q3U587 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Gm10842Q3U587 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Gm37055-201ENSMUST00000191866 133 ntBASIC10.44□□□□□ -0.74
Gm10842Q3U587 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.44□□□□□ -0.74
Gm10842Q3U587 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10842Q3U587 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10842Q3U587 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10842Q3U587 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10842Q3U587 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10842Q3U587 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Gm10842Q3U587 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10842Q3U587 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10842Q3U587 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10842Q3U587 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10842Q3U587 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms