Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Q3U1D9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Q3U1D9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Q3U1D9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.16□□□□□ -0.46
Q3U1D9 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Q3U1D9 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Q3U1D9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.16□□□□□ -0.46
Q3U1D9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Q3U1D9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.16□□□□□ -0.46
Q3U1D9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.16□□□□□ -0.46
Q3U1D9 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.16□□□□□ -0.46
Q3U1D9 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.16□□□□□ -0.46
Q3U1D9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Q3U1D9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Q3U1D9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Q3U1D9 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.16□□□□□ -0.46
Q3U1D9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Q3U1D9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Q3U1D9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Q3U1D9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Q3U1D9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Q3U1D9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Q3U1D9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Q3U1D9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.16□□□□□ -0.46
Q3U1D9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Q3U1D9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Q3U1D9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Q3U1D9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Q3U1D9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Q3U1D9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Q3U1D9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Q3U1D9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Q3U1D9 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.15□□□□□ -0.46
Q3U1D9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Q3U1D9 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Q3U1D9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Q3U1D9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Q3U1D9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Q3U1D9 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Q3U1D9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.15□□□□□ -0.46
Q3U1D9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Q3U1D9 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Q3U1D9 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Q3U1D9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Q3U1D9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.15□□□□□ -0.46
Q3U1D9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Q3U1D9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Q3U1D9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Q3U1D9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.15□□□□□ -0.46
Q3U1D9 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.15□□□□□ -0.46
Q3U1D9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.15□□□□□ -0.46
Q3U1D9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Q3U1D9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Q3U1D9 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.15□□□□□ -0.46
Q3U1D9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Q3U1D9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Q3U1D9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Q3U1D9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Q3U1D9 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Q3U1D9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Q3U1D9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Q3U1D9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Q3U1D9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Q3U1D9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Q3U1D9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Q3U1D9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Q3U1D9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Q3U1D9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Q3U1D9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.14□□□□□ -0.47
Q3U1D9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.14□□□□□ -0.47
Q3U1D9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Q3U1D9 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.14□□□□□ -0.47
Q3U1D9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Q3U1D9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.14□□□□□ -0.47
Q3U1D9 Gm12341-201ENSMUST00000119724 503 ntBASIC12.14□□□□□ -0.47
Q3U1D9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Gm13385-201ENSMUST00000121089 220 ntBASIC12.14□□□□□ -0.47
Q3U1D9 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.14□□□□□ -0.47
Q3U1D9 Gm24420-201ENSMUST00000176676 59 ntBASIC12.14□□□□□ -0.47
Q3U1D9 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.14□□□□□ -0.47
Q3U1D9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.14□□□□□ -0.47
Q3U1D9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.14□□□□□ -0.47
Q3U1D9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms