Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.78□□□□□ -0.2
Q3KNL4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.78□□□□□ -0.2
Q3KNL4 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.78□□□□□ -0.2
Q3KNL4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Q3KNL4 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Q3KNL4 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.78□□□□□ -0.2
Q3KNL4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Q3KNL4 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Q3KNL4 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
Q3KNL4 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Q3KNL4 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Q3KNL4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Q3KNL4 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Q3KNL4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Q3KNL4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Q3KNL4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Q3KNL4 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Q3KNL4 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Q3KNL4 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Q3KNL4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Q3KNL4 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Q3KNL4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Q3KNL4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Q3KNL4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Q3KNL4 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Q3KNL4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Q3KNL4 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Q3KNL4 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Q3KNL4 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Q3KNL4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Q3KNL4 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Q3KNL4 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Q3KNL4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Q3KNL4 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Q3KNL4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Q3KNL4 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Q3KNL4 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Q3KNL4 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Q3KNL4 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.76□□□□□ -0.21
Q3KNL4 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Q3KNL4 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Q3KNL4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Q3KNL4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.76□□□□□ -0.21
Q3KNL4 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.76□□□□□ -0.21
Q3KNL4 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Q3KNL4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.76□□□□□ -0.21
Q3KNL4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.76□□□□□ -0.21
Q3KNL4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Q3KNL4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.76□□□□□ -0.21
Q3KNL4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.76□□□□□ -0.21
Q3KNL4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Q3KNL4 Gm20553-201ENSMUST00000204205 844 ntBASIC13.76□□□□□ -0.21
Q3KNL4 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Q3KNL4 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.76□□□□□ -0.21
Q3KNL4 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Q3KNL4 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Q3KNL4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Q3KNL4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Q3KNL4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Q3KNL4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Q3KNL4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Q3KNL4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Q3KNL4 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Q3KNL4 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Q3KNL4 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Q3KNL4 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Q3KNL4 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Q3KNL4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Q3KNL4 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Q3KNL4 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.75□□□□□ -0.21
Q3KNL4 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Q3KNL4 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Q3KNL4 Gm15467-201ENSMUST00000120582 445 ntBASIC13.75□□□□□ -0.21
Q3KNL4 Gm12882-201ENSMUST00000121696 517 ntBASIC13.75□□□□□ -0.21
Q3KNL4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.75□□□□□ -0.21
Q3KNL4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Q3KNL4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.75□□□□□ -0.21
Q3KNL4 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms