Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Hspg2Q05793 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.07□□□□□ -0.8
Hspg2Q05793 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Gm12241-201ENSMUST00000118330 726 ntBASIC10.07□□□□□ -0.8
Hspg2Q05793 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.07□□□□□ -0.8
Hspg2Q05793 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Hspg2Q05793 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Gm37489-201ENSMUST00000191883 159 ntBASIC10.07□□□□□ -0.8
Hspg2Q05793 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Hspg2Q05793 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.07□□□□□ -0.8
Hspg2Q05793 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Hspg2Q05793 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Hspg2Q05793 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Gm14130-201ENSMUST00000118417 987 ntBASIC10.07□□□□□ -0.8
Hspg2Q05793 Gm16479-201ENSMUST00000121706 932 ntBASIC10.07□□□□□ -0.8
Hspg2Q05793 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Hspg2Q05793 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Gm7467-201ENSMUST00000185173 652 ntBASIC10.07□□□□□ -0.8
Hspg2Q05793 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Hspg2Q05793 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC10.06□□□□□ -0.8
Hspg2Q05793 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.06□□□□□ -0.8
Hspg2Q05793 Gm12203-201ENSMUST00000118235 598 ntBASIC10.06□□□□□ -0.8
Hspg2Q05793 Gm12209-201ENSMUST00000120089 596 ntBASIC10.06□□□□□ -0.8
Hspg2Q05793 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Hspg2Q05793 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Hspg2Q05793 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.06□□□□□ -0.8
Hspg2Q05793 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Hspg2Q05793 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Hspg2Q05793 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC10.06□□□□□ -0.8
Hspg2Q05793 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.06□□□□□ -0.8
Hspg2Q05793 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Hspg2Q05793 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC10.06□□□□□ -0.8
Hspg2Q05793 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
Hspg2Q05793 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Hspg2Q05793 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Hspg2Q05793 Gm10608-202ENSMUST00000213924 676 ntBASIC10.06□□□□□ -0.8
Hspg2Q05793 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.06□□□□□ -0.8
Hspg2Q05793 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Hspg2Q05793 Gm13316-201ENSMUST00000140537 691 ntBASIC10.06□□□□□ -0.8
Hspg2Q05793 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC10.06□□□□□ -0.8
Hspg2Q05793 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.06□□□□□ -0.8
Hspg2Q05793 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.06□□□□□ -0.8
Hspg2Q05793 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms