Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PrkdcP97313 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC9.31□□□□□ -0.92
PrkdcP97313 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Gm14451-201ENSMUST00000121581 1542 ntBASIC9.31□□□□□ -0.92
PrkdcP97313 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC9.31□□□□□ -0.92
PrkdcP97313 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Gm18734-201ENSMUST00000172937 808 ntBASIC9.31□□□□□ -0.92
PrkdcP97313 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
PrkdcP97313 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC9.31□□□□□ -0.92
PrkdcP97313 Gm30437-201ENSMUST00000206086 1201 ntBASIC9.31□□□□□ -0.92
PrkdcP97313 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 AC132901.1-201ENSMUST00000224345 508 ntBASIC9.31□□□□□ -0.92
PrkdcP97313 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
PrkdcP97313 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PrkdcP97313 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PrkdcP97313 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PrkdcP97313 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC9.3□□□□□ -0.92
PrkdcP97313 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC9.3□□□□□ -0.92
PrkdcP97313 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC9.3□□□□□ -0.92
PrkdcP97313 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PrkdcP97313 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PrkdcP97313 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
PrkdcP97313 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
PrkdcP97313 Gm15131-201ENSMUST00000119124 595 ntBASIC9.3□□□□□ -0.92
PrkdcP97313 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PrkdcP97313 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PrkdcP97313 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC9.3□□□□□ -0.92
PrkdcP97313 Gm45433-201ENSMUST00000209386 247 ntBASIC9.3□□□□□ -0.92
PrkdcP97313 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PrkdcP97313 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PrkdcP97313 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PrkdcP97313 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PrkdcP97313 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC9.3□□□□□ -0.92
PrkdcP97313 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PrkdcP97313 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PrkdcP97313 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PrkdcP97313 Gm11930-201ENSMUST00000117788 190 ntBASIC9.3□□□□□ -0.92
PrkdcP97313 Gm12403-201ENSMUST00000121384 959 ntBASIC9.3□□□□□ -0.92
PrkdcP97313 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
PrkdcP97313 Gm4335-201ENSMUST00000182581 1004 ntBASIC9.3□□□□□ -0.92
PrkdcP97313 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC9.3□□□□□ -0.92
PrkdcP97313 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.3□□□□□ -0.92
PrkdcP97313 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC9.3□□□□□ -0.92
PrkdcP97313 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PrkdcP97313 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC9.3□□□□□ -0.92
PrkdcP97313 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PrkdcP97313 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
PrkdcP97313 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
PrkdcP97313 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC9.3□□□□□ -0.92
PrkdcP97313 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PrkdcP97313 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PrkdcP97313 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PrkdcP97313 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC9.29□□□□□ -0.92
PrkdcP97313 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
PrkdcP97313 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC9.29□□□□□ -0.92
PrkdcP97313 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
PrkdcP97313 Gm13996-201ENSMUST00000118456 430 ntBASIC9.29□□□□□ -0.92
PrkdcP97313 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Gm23218-201ENSMUST00000158124 276 ntBASIC9.29□□□□□ -0.92
PrkdcP97313 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC9.29□□□□□ -0.92
PrkdcP97313 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
PrkdcP97313 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.29□□□□□ -0.92
PrkdcP97313 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
PrkdcP97313 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Gm2231-201ENSMUST00000125661 612 ntBASIC9.29□□□□□ -0.92
PrkdcP97313 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC9.29□□□□□ -0.92
PrkdcP97313 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC9.29□□□□□ -0.92
PrkdcP97313 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms