Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43cP86449 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43cP86449 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43cP86449 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43cP86449 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43cP86449 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trim43cP86449 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trim43cP86449 Gm2445-201ENSMUST00000182798 989 ntBASIC15.24■□□□□ 0.03
Trim43cP86449 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43cP86449 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.24■□□□□ 0.03
Trim43cP86449 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43cP86449 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43cP86449 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43cP86449 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trim43cP86449 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43cP86449 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim43cP86449 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43cP86449 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim43cP86449 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43cP86449 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43cP86449 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.24■□□□□ 0.03
Trim43cP86449 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim43cP86449 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43cP86449 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43cP86449 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43cP86449 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43cP86449 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43cP86449 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43cP86449 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43cP86449 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43cP86449 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43cP86449 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43cP86449 Gm21470-201ENSMUST00000187680 696 ntBASIC15.23■□□□□ 0.03
Trim43cP86449 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43cP86449 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43cP86449 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43cP86449 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.23■□□□□ 0.03
Trim43cP86449 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.23■□□□□ 0.03
Trim43cP86449 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim43cP86449 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43cP86449 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43cP86449 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim43cP86449 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43cP86449 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43cP86449 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim43cP86449 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43cP86449 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43cP86449 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43cP86449 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trim43cP86449 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43cP86449 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43cP86449 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43cP86449 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43cP86449 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trim43cP86449 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43cP86449 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim43cP86449 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trim43cP86449 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43cP86449 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43cP86449 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43cP86449 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43cP86449 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trim43cP86449 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43cP86449 Gm10766-202ENSMUST00000194123 606 ntBASIC15.22■□□□□ 0.03
Trim43cP86449 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43cP86449 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trim43cP86449 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43cP86449 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43cP86449 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim43cP86449 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.22■□□□□ 0.03
Trim43cP86449 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43cP86449 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim43cP86449 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43cP86449 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43cP86449 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim43cP86449 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.21■□□□□ 0.03
Trim43cP86449 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim43cP86449 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.21■□□□□ 0.03
Trim43cP86449 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim43cP86449 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim43cP86449 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim43cP86449 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim43cP86449 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim43cP86449 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Trim43cP86449 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Trim43cP86449 Gm3436-201ENSMUST00000179930 840 ntBASIC15.21■□□□□ 0.03
Trim43cP86449 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim43cP86449 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim43cP86449 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim43cP86449 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim43cP86449 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim43cP86449 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trim43cP86449 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim43cP86449 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim43cP86449 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim43cP86449 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim43cP86449 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trim43cP86449 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim43cP86449 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim43cP86449 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms