Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm18049-201ENSMUST00000208909 581 ntBASIC15.45■□□□□ 0.06
Hmgb1P63158 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.45■□□□□ 0.06
Hmgb1P63158 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Hmgb1P63158 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgb1P63158 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Hmgb1P63158 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Hmgb1P63158 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgb1P63158 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Hmgb1P63158 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgb1P63158 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgb1P63158 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Hmgb1P63158 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Hmgb1P63158 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 Gm18889-201ENSMUST00000174284 929 ntBASIC15.44■□□□□ 0.06
Hmgb1P63158 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.44■□□□□ 0.06
Hmgb1P63158 AC153937.1-201ENSMUST00000218734 412 ntBASIC15.44■□□□□ 0.06
Hmgb1P63158 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.44■□□□□ 0.06
Hmgb1P63158 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.44■□□□□ 0.06
Hmgb1P63158 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Hmgb1P63158 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Hmgb1P63158 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.44■□□□□ 0.06
Hmgb1P63158 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.44■□□□□ 0.06
Hmgb1P63158 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb1P63158 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.44■□□□□ 0.06
Hmgb1P63158 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
Hmgb1P63158 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.43■□□□□ 0.06
Hmgb1P63158 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Hmgb1P63158 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.43■□□□□ 0.06
Hmgb1P63158 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.43■□□□□ 0.06
Hmgb1P63158 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.43■□□□□ 0.06
Hmgb1P63158 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.43■□□□□ 0.06
Hmgb1P63158 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.43■□□□□ 0.06
Hmgb1P63158 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.43■□□□□ 0.06
Hmgb1P63158 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Hmgb1P63158 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Hmgb1P63158 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb1P63158 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb1P63158 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Hmgb1P63158 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb1P63158 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb1P63158 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb1P63158 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb1P63158 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb1P63158 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb1P63158 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Hmgb1P63158 Gm25287-201ENSMUST00000103846 110 ntBASIC15.42■□□□□ 0.06
Hmgb1P63158 Gm22918-201ENSMUST00000103855 110 ntBASIC15.42■□□□□ 0.06
Hmgb1P63158 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb1P63158 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Hmgb1P63158 Gm13823-201ENSMUST00000119930 345 ntBASIC15.42■□□□□ 0.06
Hmgb1P63158 AA543401-201ENSMUST00000164248 1269 ntBASIC15.42■□□□□ 0.06
Hmgb1P63158 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.42■□□□□ 0.06
Hmgb1P63158 Gm27525-201ENSMUST00000184465 107 ntBASIC15.42■□□□□ 0.06
Hmgb1P63158 AW822252-206ENSMUST00000208904 237 ntBASIC15.42■□□□□ 0.06
Hmgb1P63158 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.42■□□□□ 0.06
Hmgb1P63158 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.42■□□□□ 0.06
Hmgb1P63158 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb1P63158 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb1P63158 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Hmgb1P63158 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.42■□□□□ 0.06
Hmgb1P63158 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms