Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ybx1P62960 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ybx1P62960 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.34□□□□□ -0.11
Ybx1P62960 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.34□□□□□ -0.11
Ybx1P62960 Gm44608-201ENSMUST00000206827 855 ntBASIC14.34□□□□□ -0.11
Ybx1P62960 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ybx1P62960 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ybx1P62960 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Ybx1P62960 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Ybx1P62960 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.33□□□□□ -0.11
Ybx1P62960 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ybx1P62960 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.33□□□□□ -0.11
Ybx1P62960 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Ybx1P62960 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Gm12957-201ENSMUST00000117835 377 ntBASIC14.33□□□□□ -0.12
Ybx1P62960 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.33□□□□□ -0.12
Ybx1P62960 Gm19078-201ENSMUST00000206311 727 ntBASIC14.33□□□□□ -0.12
Ybx1P62960 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.33□□□□□ -0.12
Ybx1P62960 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.33□□□□□ -0.12
Ybx1P62960 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ybx1P62960 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ybx1P62960 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ybx1P62960 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.33□□□□□ -0.12
Ybx1P62960 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.32□□□□□ -0.12
Ybx1P62960 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ybx1P62960 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ybx1P62960 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.32□□□□□ -0.12
Ybx1P62960 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Gm15429-201ENSMUST00000151268 798 ntBASIC14.32□□□□□ -0.12
Ybx1P62960 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.32□□□□□ -0.12
Ybx1P62960 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.32□□□□□ -0.12
Ybx1P62960 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.32□□□□□ -0.12
Ybx1P62960 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.32□□□□□ -0.12
Ybx1P62960 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.32□□□□□ -0.12
Ybx1P62960 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ybx1P62960 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ybx1P62960 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ybx1P62960 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms