Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gabra1P62812 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gabra1P62812 Gm10355-201ENSMUST00000097146 517 ntBASIC11.8□□□□□ -0.52
Gabra1P62812 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.8□□□□□ -0.52
Gabra1P62812 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gabra1P62812 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.8□□□□□ -0.52
Gabra1P62812 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
Gabra1P62812 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gabra1P62812 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gabra1P62812 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gabra1P62812 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gabra1P62812 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gabra1P62812 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Gabra1P62812 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Gabra1P62812 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Gabra1P62812 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gabra1P62812 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Gabra1P62812 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gabra1P62812 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Gabra1P62812 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gabra1P62812 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.79□□□□□ -0.52
Gabra1P62812 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.79□□□□□ -0.52
Gabra1P62812 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Gm14859-201ENSMUST00000117752 357 ntBASIC11.79□□□□□ -0.52
Gabra1P62812 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Gm27357-201ENSMUST00000183754 135 ntBASIC11.79□□□□□ -0.52
Gabra1P62812 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Olfr286-202ENSMUST00000205305 969 ntBASIC11.79□□□□□ -0.52
Gabra1P62812 Gm7787-201ENSMUST00000216858 688 ntBASIC11.79□□□□□ -0.52
Gabra1P62812 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.79□□□□□ -0.52
Gabra1P62812 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.79□□□□□ -0.52
Gabra1P62812 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.79□□□□□ -0.52
Gabra1P62812 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Gabra1P62812 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Gabra1P62812 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.79□□□□□ -0.52
Gabra1P62812 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Gabra1P62812 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Gabra1P62812 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Gabra1P62812 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Gabra1P62812 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gabra1P62812 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Gabra1P62812 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gabra1P62812 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gabra1P62812 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Gabra1P62812 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gabra1P62812 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Gabra1P62812 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gabra1P62812 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gabra1P62812 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gabra1P62812 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gabra1P62812 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Gabra1P62812 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gabra1P62812 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gabra1P62812 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gabra1P62812 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.78□□□□□ -0.52
Gabra1P62812 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gabra1P62812 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Gabra1P62812 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Gabra1P62812 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.78□□□□□ -0.52
Gabra1P62812 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gabra1P62812 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gabra1P62812 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gabra1P62812 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gabra1P62812 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gabra1P62812 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms