Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn18P56857 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn18P56857 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn18P56857 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cldn18P56857 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn18P56857 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cldn18P56857 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn18P56857 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn18P56857 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn18P56857 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Cldn18P56857 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn18P56857 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn18P56857 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn18P56857 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Cldn18P56857 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.55□□□□□ -0.4
Cldn18P56857 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cldn18P56857 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn18P56857 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Cldn18P56857 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn18P56857 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cldn18P56857 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn18P56857 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn18P56857 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn18P56857 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.55□□□□□ -0.4
Cldn18P56857 Gm14719-201ENSMUST00000121891 340 ntBASIC12.55□□□□□ -0.4
Cldn18P56857 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.55□□□□□ -0.4
Cldn18P56857 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.55□□□□□ -0.4
Cldn18P56857 Gm27838-201ENSMUST00000184829 128 ntBASIC12.55□□□□□ -0.4
Cldn18P56857 Gm10766-202ENSMUST00000194123 606 ntBASIC12.55□□□□□ -0.4
Cldn18P56857 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cldn18P56857 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.55□□□□□ -0.4
Cldn18P56857 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.55□□□□□ -0.4
Cldn18P56857 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.55□□□□□ -0.4
Cldn18P56857 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn18P56857 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cldn18P56857 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn18P56857 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cldn18P56857 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.55□□□□□ -0.4
Cldn18P56857 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn18P56857 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cldn18P56857 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn18P56857 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn18P56857 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn18P56857 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cldn18P56857 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn18P56857 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn18P56857 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn18P56857 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn18P56857 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn18P56857 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.55□□□□□ -0.4
Cldn18P56857 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Cldn18P56857 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.54□□□□□ -0.4
Cldn18P56857 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.54□□□□□ -0.4
Cldn18P56857 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.54□□□□□ -0.4
Cldn18P56857 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Cldn18P56857 Gm14057-201ENSMUST00000120631 482 ntBASIC12.54□□□□□ -0.4
Cldn18P56857 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.54□□□□□ -0.4
Cldn18P56857 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.54□□□□□ -0.4
Cldn18P56857 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Cldn18P56857 Gm4804-201ENSMUST00000182234 999 ntBASIC12.54□□□□□ -0.4
Cldn18P56857 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cldn18P56857 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 Gm29741-201ENSMUST00000192667 421 ntBASIC12.54□□□□□ -0.4
Cldn18P56857 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.54□□□□□ -0.4
Cldn18P56857 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.54□□□□□ -0.4
Cldn18P56857 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.54□□□□□ -0.4
Cldn18P56857 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.54□□□□□ -0.4
Cldn18P56857 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cldn18P56857 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 Mir497b-201ENSMUST00000093601 125 ntBASIC12.54□□□□□ -0.4
Cldn18P56857 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.54□□□□□ -0.4
Cldn18P56857 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cldn18P56857 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn18P56857 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cldn18P56857 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.53□□□□□ -0.4
Cldn18P56857 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms