Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.09□□□□□ -0.15
SmoP56726 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SmoP56726 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SmoP56726 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SmoP56726 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SmoP56726 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
SmoP56726 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SmoP56726 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SmoP56726 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SmoP56726 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SmoP56726 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SmoP56726 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SmoP56726 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
SmoP56726 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SmoP56726 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
SmoP56726 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SmoP56726 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SmoP56726 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SmoP56726 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SmoP56726 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
SmoP56726 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SmoP56726 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SmoP56726 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SmoP56726 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SmoP56726 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SmoP56726 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SmoP56726 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SmoP56726 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SmoP56726 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SmoP56726 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SmoP56726 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SmoP56726 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SmoP56726 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
SmoP56726 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.08□□□□□ -0.16
SmoP56726 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.08□□□□□ -0.16
SmoP56726 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.08□□□□□ -0.16
SmoP56726 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.08□□□□□ -0.16
SmoP56726 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SmoP56726 Gm29741-201ENSMUST00000192667 421 ntBASIC14.08□□□□□ -0.16
SmoP56726 Gm18905-201ENSMUST00000205454 928 ntBASIC14.08□□□□□ -0.16
SmoP56726 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SmoP56726 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.08□□□□□ -0.16
SmoP56726 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SmoP56726 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SmoP56726 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SmoP56726 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SmoP56726 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SmoP56726 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
SmoP56726 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.08□□□□□ -0.16
SmoP56726 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SmoP56726 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SmoP56726 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SmoP56726 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SmoP56726 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.08□□□□□ -0.16
SmoP56726 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SmoP56726 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SmoP56726 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SmoP56726 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SmoP56726 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SmoP56726 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SmoP56726 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SmoP56726 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SmoP56726 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SmoP56726 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SmoP56726 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SmoP56726 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SmoP56726 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SmoP56726 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SmoP56726 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.07□□□□□ -0.16
SmoP56726 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SmoP56726 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SmoP56726 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SmoP56726 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SmoP56726 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SmoP56726 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SmoP56726 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SmoP56726 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SmoP56726 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SmoP56726 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SmoP56726 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.07□□□□□ -0.16
SmoP56726 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SmoP56726 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SmoP56726 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SmoP56726 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SmoP56726 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SmoP56726 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.07□□□□□ -0.16
SmoP56726 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SmoP56726 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SmoP56726 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms