Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Sox3P53784 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.46□□□□□ -0.25
Sox3P53784 Gm9719-201ENSMUST00000162765 543 ntBASIC13.46□□□□□ -0.25
Sox3P53784 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Sox3P53784 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.46□□□□□ -0.25
Sox3P53784 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.46□□□□□ -0.25
Sox3P53784 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox3P53784 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox3P53784 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox3P53784 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox3P53784 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox3P53784 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.46□□□□□ -0.26
Sox3P53784 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox3P53784 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Sox3P53784 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox3P53784 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox3P53784 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox3P53784 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Sox3P53784 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox3P53784 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.45□□□□□ -0.26
Sox3P53784 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sox3P53784 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sox3P53784 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.45□□□□□ -0.26
Sox3P53784 Gm43703-201ENSMUST00000200523 763 ntBASIC13.45□□□□□ -0.26
Sox3P53784 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sox3P53784 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sox3P53784 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sox3P53784 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox3P53784 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox3P53784 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox3P53784 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox3P53784 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox3P53784 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Sox3P53784 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox3P53784 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox3P53784 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.44□□□□□ -0.26
Sox3P53784 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox3P53784 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox3P53784 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox3P53784 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sox3P53784 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox3P53784 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Sox3P53784 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.44□□□□□ -0.26
Sox3P53784 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Sox3P53784 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Sox3P53784 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox3P53784 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.44□□□□□ -0.26
Sox3P53784 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox3P53784 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.44□□□□□ -0.26
Sox3P53784 Gm5035-201ENSMUST00000215581 927 ntBASIC13.44□□□□□ -0.26
Sox3P53784 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.44□□□□□ -0.26
Sox3P53784 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox3P53784 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox3P53784 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.44□□□□□ -0.26
Sox3P53784 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox3P53784 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox3P53784 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox3P53784 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Sox3P53784 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.44□□□□□ -0.26
Sox3P53784 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox3P53784 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox3P53784 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox3P53784 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
Sox3P53784 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.43□□□□□ -0.26
Sox3P53784 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Gm12742-201ENSMUST00000117326 410 ntBASIC13.43□□□□□ -0.26
Sox3P53784 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.43□□□□□ -0.26
Sox3P53784 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Gm9002-201ENSMUST00000178437 499 ntBASIC13.43□□□□□ -0.26
Sox3P53784 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms