Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.19□□□□□ -0.14
Lhx3P50481 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.19□□□□□ -0.14
Lhx3P50481 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.19□□□□□ -0.14
Lhx3P50481 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Lhx3P50481 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Lhx3P50481 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.19□□□□□ -0.14
Lhx3P50481 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.18□□□□□ -0.14
Lhx3P50481 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lhx3P50481 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.18□□□□□ -0.14
Lhx3P50481 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.18□□□□□ -0.14
Lhx3P50481 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Lhx3P50481 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.18□□□□□ -0.14
Lhx3P50481 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Lhx3P50481 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.18□□□□□ -0.14
Lhx3P50481 Gm5279-201ENSMUST00000199575 745 ntBASIC14.18□□□□□ -0.14
Lhx3P50481 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.18□□□□□ -0.14
Lhx3P50481 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.18□□□□□ -0.14
Lhx3P50481 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lhx3P50481 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.18□□□□□ -0.14
Lhx3P50481 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Lhx3P50481 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Lhx3P50481 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Lhx3P50481 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.18□□□□□ -0.14
Lhx3P50481 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx3P50481 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Lhx3P50481 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.17□□□□□ -0.14
Lhx3P50481 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Lhx3P50481 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Lhx3P50481 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.17□□□□□ -0.14
Lhx3P50481 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.17□□□□□ -0.14
Lhx3P50481 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.17□□□□□ -0.14
Lhx3P50481 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.17□□□□□ -0.14
Lhx3P50481 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.17□□□□□ -0.14
Lhx3P50481 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.17□□□□□ -0.14
Lhx3P50481 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Lhx3P50481 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Lhx3P50481 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx3P50481 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms