Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
SftpbP50405 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.36□□□□□ -0.11
SftpbP50405 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SftpbP50405 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.35□□□□□ -0.11
SftpbP50405 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SftpbP50405 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.35□□□□□ -0.11
SftpbP50405 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.35□□□□□ -0.11
SftpbP50405 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SftpbP50405 Gm11025-201ENSMUST00000140773 466 ntBASIC14.35□□□□□ -0.11
SftpbP50405 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.35□□□□□ -0.11
SftpbP50405 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.35□□□□□ -0.11
SftpbP50405 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.35□□□□□ -0.11
SftpbP50405 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.35□□□□□ -0.11
SftpbP50405 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.35□□□□□ -0.11
SftpbP50405 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SftpbP50405 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.35□□□□□ -0.11
SftpbP50405 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SftpbP50405 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpbP50405 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SftpbP50405 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SftpbP50405 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SftpbP50405 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpbP50405 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpbP50405 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpbP50405 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.34□□□□□ -0.11
SftpbP50405 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.34□□□□□ -0.11
SftpbP50405 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SftpbP50405 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpbP50405 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpbP50405 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpbP50405 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpbP50405 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.34□□□□□ -0.11
SftpbP50405 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpbP50405 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpbP50405 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpbP50405 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SftpbP50405 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpbP50405 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SftpbP50405 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpbP50405 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpbP50405 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SftpbP50405 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpbP50405 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SftpbP50405 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.33□□□□□ -0.11
SftpbP50405 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SftpbP50405 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SftpbP50405 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
SftpbP50405 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SftpbP50405 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SftpbP50405 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SftpbP50405 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpbP50405 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SftpbP50405 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpbP50405 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpbP50405 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.33□□□□□ -0.12
SftpbP50405 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.33□□□□□ -0.12
SftpbP50405 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.33□□□□□ -0.12
SftpbP50405 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.33□□□□□ -0.12
SftpbP50405 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.33□□□□□ -0.12
SftpbP50405 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpbP50405 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SftpbP50405 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
SftpbP50405 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SftpbP50405 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpbP50405 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpbP50405 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SftpbP50405 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpbP50405 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpbP50405 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.33□□□□□ -0.12
SftpbP50405 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms