Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.31□□□□□ -0.44
GdnfP48540 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
GdnfP48540 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.3□□□□□ -0.44
GdnfP48540 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.3□□□□□ -0.44
GdnfP48540 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
GdnfP48540 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
GdnfP48540 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
GdnfP48540 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.3□□□□□ -0.44
GdnfP48540 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
GdnfP48540 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.3□□□□□ -0.44
GdnfP48540 Gm8000-201ENSMUST00000188378 592 ntBASIC12.3□□□□□ -0.44
GdnfP48540 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.3□□□□□ -0.44
GdnfP48540 Gm2272-201ENSMUST00000194903 582 ntBASIC12.3□□□□□ -0.44
GdnfP48540 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.3□□□□□ -0.44
GdnfP48540 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.3□□□□□ -0.44
GdnfP48540 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 Gm10175-201ENSMUST00000086013 645 ntBASIC12.3□□□□□ -0.44
GdnfP48540 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.3□□□□□ -0.44
GdnfP48540 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
GdnfP48540 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.3□□□□□ -0.44
GdnfP48540 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
GdnfP48540 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
GdnfP48540 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GdnfP48540 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
GdnfP48540 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.29□□□□□ -0.44
GdnfP48540 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
GdnfP48540 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
GdnfP48540 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
GdnfP48540 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.29□□□□□ -0.44
GdnfP48540 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.29□□□□□ -0.44
GdnfP48540 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.29□□□□□ -0.44
GdnfP48540 Mir8117-201ENSMUST00000184773 107 ntBASIC12.29□□□□□ -0.44
GdnfP48540 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.29□□□□□ -0.44
GdnfP48540 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.29□□□□□ -0.44
GdnfP48540 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.29□□□□□ -0.44
GdnfP48540 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
GdnfP48540 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
GdnfP48540 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
GdnfP48540 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
GdnfP48540 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
GdnfP48540 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
GdnfP48540 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
GdnfP48540 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.28□□□□□ -0.44
GdnfP48540 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GdnfP48540 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
GdnfP48540 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
GdnfP48540 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
GdnfP48540 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GdnfP48540 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms