Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.14□□□□□ -0.47
TgfaP48030 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.14□□□□□ -0.47
TgfaP48030 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.14□□□□□ -0.47
TgfaP48030 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Gm10012-201ENSMUST00000078252 192 ntBASIC12.14□□□□□ -0.47
TgfaP48030 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
TgfaP48030 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.14□□□□□ -0.47
TgfaP48030 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TgfaP48030 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TgfaP48030 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TgfaP48030 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TgfaP48030 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TgfaP48030 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TgfaP48030 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.13□□□□□ -0.47
TgfaP48030 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.13□□□□□ -0.47
TgfaP48030 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TgfaP48030 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.13□□□□□ -0.47
TgfaP48030 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TgfaP48030 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TgfaP48030 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TgfaP48030 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TgfaP48030 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.13□□□□□ -0.47
TgfaP48030 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TgfaP48030 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.13□□□□□ -0.47
TgfaP48030 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TgfaP48030 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TgfaP48030 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TgfaP48030 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.13□□□□□ -0.47
TgfaP48030 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TgfaP48030 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
TgfaP48030 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TgfaP48030 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TgfaP48030 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TgfaP48030 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TgfaP48030 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TgfaP48030 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.13□□□□□ -0.47
TgfaP48030 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
TgfaP48030 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TgfaP48030 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
TgfaP48030 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TgfaP48030 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
TgfaP48030 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
TgfaP48030 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
TgfaP48030 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.12□□□□□ -0.47
TgfaP48030 Gm22331-201ENSMUST00000158066 136 ntBASIC12.12□□□□□ -0.47
TgfaP48030 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.12□□□□□ -0.47
TgfaP48030 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.12□□□□□ -0.47
TgfaP48030 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.12□□□□□ -0.47
TgfaP48030 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.12□□□□□ -0.47
TgfaP48030 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TgfaP48030 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.12□□□□□ -0.47
TgfaP48030 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TgfaP48030 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TgfaP48030 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.12□□□□□ -0.47
TgfaP48030 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TgfaP48030 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.11□□□□□ -0.47
TgfaP48030 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms