Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.19□□□□□ -0.3
Sox6P40645 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.19□□□□□ -0.3
Sox6P40645 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.19□□□□□ -0.3
Sox6P40645 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Sox6P40645 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.19□□□□□ -0.3
Sox6P40645 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.19□□□□□ -0.3
Sox6P40645 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox6P40645 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox6P40645 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sox6P40645 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sox6P40645 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox6P40645 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox6P40645 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sox6P40645 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox6P40645 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox6P40645 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox6P40645 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox6P40645 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox6P40645 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.18□□□□□ -0.3
Sox6P40645 Gm4995-201ENSMUST00000117247 432 ntBASIC13.18□□□□□ -0.3
Sox6P40645 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.18□□□□□ -0.3
Sox6P40645 Gm14822-201ENSMUST00000122247 291 ntBASIC13.18□□□□□ -0.3
Sox6P40645 Mir1895-201ENSMUST00000122615 79 ntBASIC13.18□□□□□ -0.3
Sox6P40645 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox6P40645 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox6P40645 Gm27494-201ENSMUST00000184735 189 ntBASIC13.18□□□□□ -0.3
Sox6P40645 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox6P40645 Gm45612-201ENSMUST00000211320 160 ntBASIC13.18□□□□□ -0.3
Sox6P40645 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox6P40645 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox6P40645 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox6P40645 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox6P40645 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.18□□□□□ -0.3
Sox6P40645 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox6P40645 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox6P40645 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox6P40645 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.18□□□□□ -0.3
Sox6P40645 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox6P40645 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sox6P40645 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sox6P40645 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Sox6P40645 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Gm11543-201ENSMUST00000120758 370 ntBASIC13.17□□□□□ -0.3
Sox6P40645 Gm6736-201ENSMUST00000166583 948 ntBASIC13.17□□□□□ -0.3
Sox6P40645 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox6P40645 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.17□□□□□ -0.3
Sox6P40645 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox6P40645 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.17□□□□□ -0.3
Sox6P40645 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sox6P40645 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox6P40645 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sox6P40645 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
Sox6P40645 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms