Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxa1P35582 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxa1P35582 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Foxa1P35582 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxa1P35582 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxa1P35582 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.97□□□□□ -0.33
Foxa1P35582 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxa1P35582 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.97□□□□□ -0.33
Foxa1P35582 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Foxa1P35582 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Foxa1P35582 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxa1P35582 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.97□□□□□ -0.33
Foxa1P35582 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Foxa1P35582 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Foxa1P35582 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxa1P35582 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.97□□□□□ -0.33
Foxa1P35582 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Foxa1P35582 Gm3436-201ENSMUST00000179930 840 ntBASIC12.97□□□□□ -0.33
Foxa1P35582 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.97□□□□□ -0.33
Foxa1P35582 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Foxa1P35582 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.97□□□□□ -0.33
Foxa1P35582 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.97□□□□□ -0.33
Foxa1P35582 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxa1P35582 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.97□□□□□ -0.33
Foxa1P35582 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxa1P35582 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxa1P35582 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Foxa1P35582 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.97□□□□□ -0.33
Foxa1P35582 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxa1P35582 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Foxa1P35582 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.96□□□□□ -0.33
Foxa1P35582 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxa1P35582 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxa1P35582 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Foxa1P35582 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxa1P35582 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxa1P35582 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxa1P35582 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Foxa1P35582 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Foxa1P35582 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxa1P35582 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Foxa1P35582 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
Foxa1P35582 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Foxa1P35582 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxa1P35582 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Foxa1P35582 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxa1P35582 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.96□□□□□ -0.33
Foxa1P35582 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Foxa1P35582 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.96□□□□□ -0.33
Foxa1P35582 Gm27306-201ENSMUST00000183970 107 ntBASIC12.96□□□□□ -0.33
Foxa1P35582 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Foxa1P35582 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Foxa1P35582 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.96□□□□□ -0.33
Foxa1P35582 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.96□□□□□ -0.33
Foxa1P35582 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxa1P35582 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Foxa1P35582 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Foxa1P35582 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxa1P35582 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxa1P35582 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxa1P35582 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Foxa1P35582 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxa1P35582 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Foxa1P35582 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Foxa1P35582 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.34
Foxa1P35582 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Foxa1P35582 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.96□□□□□ -0.34
Foxa1P35582 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Foxa1P35582 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Foxa1P35582 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Foxa1P35582 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Foxa1P35582 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Foxa1P35582 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Foxa1P35582 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Foxa1P35582 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Foxa1P35582 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Foxa1P35582 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Foxa1P35582 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Foxa1P35582 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Foxa1P35582 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Foxa1P35582 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Foxa1P35582 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Foxa1P35582 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Foxa1P35582 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.95□□□□□ -0.34
Foxa1P35582 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Foxa1P35582 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Foxa1P35582 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Foxa1P35582 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.95□□□□□ -0.34
Foxa1P35582 Gm12151-201ENSMUST00000121374 290 ntBASIC12.95□□□□□ -0.34
Foxa1P35582 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Foxa1P35582 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.95□□□□□ -0.34
Foxa1P35582 Gm27989-201ENSMUST00000184721 107 ntBASIC12.95□□□□□ -0.34
Foxa1P35582 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.95□□□□□ -0.34
Foxa1P35582 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.95□□□□□ -0.34
Foxa1P35582 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Foxa1P35582 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Foxa1P35582 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms