Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nedd8P29595 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Nedd8P29595 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Nedd8P29595 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.94□□□□□ -0.34
Nedd8P29595 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nedd8P29595 Gm2451-201ENSMUST00000199447 999 ntBASIC12.94□□□□□ -0.34
Nedd8P29595 Gm10290-201ENSMUST00000200451 999 ntBASIC12.94□□□□□ -0.34
Nedd8P29595 Gm5587-201ENSMUST00000206270 674 ntBASIC12.94□□□□□ -0.34
Nedd8P29595 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nedd8P29595 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.94□□□□□ -0.34
Nedd8P29595 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nedd8P29595 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nedd8P29595 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nedd8P29595 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nedd8P29595 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nedd8P29595 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nedd8P29595 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nedd8P29595 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Nedd8P29595 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nedd8P29595 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nedd8P29595 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nedd8P29595 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nedd8P29595 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.93□□□□□ -0.34
Nedd8P29595 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.93□□□□□ -0.34
Nedd8P29595 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nedd8P29595 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.93□□□□□ -0.34
Nedd8P29595 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.93□□□□□ -0.34
Nedd8P29595 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.93□□□□□ -0.34
Nedd8P29595 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Nedd8P29595 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.93□□□□□ -0.34
Nedd8P29595 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.93□□□□□ -0.34
Nedd8P29595 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.93□□□□□ -0.34
Nedd8P29595 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Nedd8P29595 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nedd8P29595 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
Nedd8P29595 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nedd8P29595 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.93□□□□□ -0.34
Nedd8P29595 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nedd8P29595 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd8P29595 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nedd8P29595 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.92□□□□□ -0.34
Nedd8P29595 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd8P29595 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd8P29595 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd8P29595 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd8P29595 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd8P29595 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nedd8P29595 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd8P29595 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.92□□□□□ -0.34
Nedd8P29595 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.92□□□□□ -0.34
Nedd8P29595 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Nedd8P29595 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Nedd8P29595 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Nedd8P29595 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd8P29595 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.92□□□□□ -0.34
Nedd8P29595 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd8P29595 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd8P29595 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nedd8P29595 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd8P29595 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd8P29595 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd8P29595 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nedd8P29595 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Nedd8P29595 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nedd8P29595 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.92□□□□□ -0.34
Nedd8P29595 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Nedd8P29595 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd8P29595 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd8P29595 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd8P29595 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nedd8P29595 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd8P29595 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd8P29595 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nedd8P29595 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms