Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Gm6912-201ENSMUST00000117218 544 ntBASIC13.95□□□□□ -0.18
Nckap1P28660 Gm12341-201ENSMUST00000119724 503 ntBASIC13.95□□□□□ -0.18
Nckap1P28660 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nckap1P28660 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nckap1P28660 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Nckap1P28660 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Nckap1P28660 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.95□□□□□ -0.18
Nckap1P28660 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nckap1P28660 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nckap1P28660 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nckap1P28660 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nckap1P28660 Carlr-201ENSMUST00000181515 2574 ntBASIC13.94□□□□□ -0.18
Nckap1P28660 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.94□□□□□ -0.18
Nckap1P28660 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nckap1P28660 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nckap1P28660 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Nckap1P28660 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nckap1P28660 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nckap1P28660 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.94□□□□□ -0.18
Nckap1P28660 Gm15806-201ENSMUST00000120696 955 ntBASIC13.94□□□□□ -0.18
Nckap1P28660 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nckap1P28660 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nckap1P28660 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nckap1P28660 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.94□□□□□ -0.18
Nckap1P28660 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nckap1P28660 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nckap1P28660 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.94□□□□□ -0.18
Nckap1P28660 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.94□□□□□ -0.18
Nckap1P28660 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nckap1P28660 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nckap1P28660 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nckap1P28660 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nckap1P28660 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nckap1P28660 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nckap1P28660 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nckap1P28660 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nckap1P28660 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nckap1P28660 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nckap1P28660 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.94□□□□□ -0.18
Nckap1P28660 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
Nckap1P28660 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Nckap1P28660 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.93□□□□□ -0.18
Nckap1P28660 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.93□□□□□ -0.18
Nckap1P28660 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Efs-202ENSMUST00000227037 2540 ntBASIC13.93□□□□□ -0.18
Nckap1P28660 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Nckap1P28660 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.93□□□□□ -0.18
Nckap1P28660 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Nckap1P28660 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Nckap1P28660 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.93□□□□□ -0.18
Nckap1P28660 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nckap1P28660 Gm9002-201ENSMUST00000178437 499 ntBASIC13.93□□□□□ -0.18
Nckap1P28660 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.93□□□□□ -0.18
Nckap1P28660 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Gm18905-201ENSMUST00000205454 928 ntBASIC13.93□□□□□ -0.18
Nckap1P28660 Gm18307-201ENSMUST00000206864 949 ntBASIC13.93□□□□□ -0.18
Nckap1P28660 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.93□□□□□ -0.18
Nckap1P28660 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.93□□□□□ -0.18
Nckap1P28660 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nckap1P28660 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nckap1P28660 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.92□□□□□ -0.18
Nckap1P28660 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nckap1P28660 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Nckap1P28660 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.92□□□□□ -0.18
Nckap1P28660 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nckap1P28660 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nckap1P28660 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nckap1P28660 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nckap1P28660 Gm27701-201ENSMUST00000184498 110 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms