Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.41□□□□□ -0.1
Nfkb1P25799 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.41□□□□□ -0.1
Nfkb1P25799 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nfkb1P25799 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nfkb1P25799 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nfkb1P25799 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Nfkb1P25799 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nfkb1P25799 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.4□□□□□ -0.1
Nfkb1P25799 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nfkb1P25799 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nfkb1P25799 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nfkb1P25799 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nfkb1P25799 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.4□□□□□ -0.1
Nfkb1P25799 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nfkb1P25799 Gm17795-201ENSMUST00000214505 757 ntBASIC14.4□□□□□ -0.1
Nfkb1P25799 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.4□□□□□ -0.1
Nfkb1P25799 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nfkb1P25799 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.4□□□□□ -0.1
Nfkb1P25799 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nfkb1P25799 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.4□□□□□ -0.1
Nfkb1P25799 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nfkb1P25799 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nfkb1P25799 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nfkb1P25799 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nfkb1P25799 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nfkb1P25799 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nfkb1P25799 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nfkb1P25799 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nfkb1P25799 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nfkb1P25799 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.4□□□□□ -0.1
Nfkb1P25799 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Nfkb1P25799 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nfkb1P25799 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nfkb1P25799 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nfkb1P25799 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.39□□□□□ -0.11
Nfkb1P25799 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.39□□□□□ -0.11
Nfkb1P25799 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nfkb1P25799 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.39□□□□□ -0.11
Nfkb1P25799 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.39□□□□□ -0.11
Nfkb1P25799 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.39□□□□□ -0.11
Nfkb1P25799 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.39□□□□□ -0.11
Nfkb1P25799 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.39□□□□□ -0.11
Nfkb1P25799 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nfkb1P25799 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.38□□□□□ -0.11
Nfkb1P25799 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nfkb1P25799 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.38□□□□□ -0.11
Nfkb1P25799 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nfkb1P25799 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nfkb1P25799 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nfkb1P25799 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nfkb1P25799 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nfkb1P25799 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nfkb1P25799 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nfkb1P25799 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nfkb1P25799 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nfkb1P25799 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nfkb1P25799 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nfkb1P25799 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
Nfkb1P25799 Gm5354-201ENSMUST00000182417 973 ntBASIC14.38□□□□□ -0.11
Nfkb1P25799 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nfkb1P25799 Gm45384-201ENSMUST00000210451 277 ntBASIC14.38□□□□□ -0.11
Nfkb1P25799 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nfkb1P25799 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nfkb1P25799 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nfkb1P25799 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nfkb1P25799 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nfkb1P25799 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nfkb1P25799 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Nfkb1P25799 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms