Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Clk1P22518 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Clk1P22518 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.12□□□□□ -0.31
Clk1P22518 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Clk1P22518 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.11□□□□□ -0.31
Clk1P22518 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.11□□□□□ -0.31
Clk1P22518 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.11□□□□□ -0.31
Clk1P22518 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Clk1P22518 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.11□□□□□ -0.31
Clk1P22518 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.11□□□□□ -0.31
Clk1P22518 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Clk1P22518 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Clk1P22518 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC13.11□□□□□ -0.31
Clk1P22518 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Clk1P22518 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.11□□□□□ -0.31
Clk1P22518 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clk1P22518 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Clk1P22518 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Clk1P22518 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.1□□□□□ -0.31
Clk1P22518 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.1□□□□□ -0.31
Clk1P22518 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.1□□□□□ -0.31
Clk1P22518 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 AC123738.2-201ENSMUST00000223791 1899 ntBASIC13.1□□□□□ -0.31
Clk1P22518 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Clk1P22518 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Clk1P22518 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clk1P22518 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.09□□□□□ -0.31
Clk1P22518 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Clk1P22518 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.09□□□□□ -0.31
Clk1P22518 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.09□□□□□ -0.31
Clk1P22518 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Clk1P22518 Gm9824-201ENSMUST00000178707 561 ntBASIC13.09□□□□□ -0.31
Clk1P22518 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.09□□□□□ -0.31
Clk1P22518 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.09□□□□□ -0.31
Clk1P22518 Gm18049-201ENSMUST00000208909 581 ntBASIC13.09□□□□□ -0.31
Clk1P22518 Chchd1-203ENSMUST00000224633 557 ntBASIC13.09□□□□□ -0.31
Clk1P22518 Pck2-205ENSMUST00000226352 2784 ntBASIC13.09□□□□□ -0.31
Clk1P22518 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms