Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.8□□□□□ -0.36
Col4a2P08122 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.8□□□□□ -0.36
Col4a2P08122 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Col4a2P08122 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Col4a2P08122 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Gm1335-201ENSMUST00000121653 386 ntBASIC12.79□□□□□ -0.36
Col4a2P08122 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.79□□□□□ -0.36
Col4a2P08122 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.79□□□□□ -0.36
Col4a2P08122 Gm38341-201ENSMUST00000195357 515 ntBASIC12.79□□□□□ -0.36
Col4a2P08122 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.79□□□□□ -0.36
Col4a2P08122 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.79□□□□□ -0.36
Col4a2P08122 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.79□□□□□ -0.36
Col4a2P08122 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Col4a2P08122 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.79□□□□□ -0.36
Col4a2P08122 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
Col4a2P08122 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.79□□□□□ -0.36
Col4a2P08122 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Col4a2P08122 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.79□□□□□ -0.36
Col4a2P08122 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC12.79□□□□□ -0.36
Col4a2P08122 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.79□□□□□ -0.36
Col4a2P08122 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.79□□□□□ -0.36
Col4a2P08122 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.79□□□□□ -0.36
Col4a2P08122 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.79□□□□□ -0.36
Col4a2P08122 Gm38266-201ENSMUST00000194931 421 ntBASIC12.79□□□□□ -0.36
Col4a2P08122 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Gm7783-201ENSMUST00000204795 781 ntBASIC12.79□□□□□ -0.36
Col4a2P08122 Olfr284-202ENSMUST00000206647 966 ntBASIC12.79□□□□□ -0.36
Col4a2P08122 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Gm24447-201ENSMUST00000083977 338 ntBASIC12.79□□□□□ -0.36
Col4a2P08122 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a2P08122 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col4a2P08122 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Col4a2P08122 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.78□□□□□ -0.36
Col4a2P08122 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.78□□□□□ -0.36
Col4a2P08122 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Col4a2P08122 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.78□□□□□ -0.36
Col4a2P08122 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Col4a2P08122 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.78□□□□□ -0.36
Col4a2P08122 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.78□□□□□ -0.36
Col4a2P08122 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 Gm10461-201ENSMUST00000202073 4786 ntBASIC12.78□□□□□ -0.36
Col4a2P08122 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Col4a2P08122 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Col4a2P08122 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a2P08122 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.78□□□□□ -0.36
Col4a2P08122 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms